STRINGSTRING
xylZ xylZ xylL xylL xylY xylY xylX xylX catC catC nuoD nuoD catA catA catB catB fadH1 fadH1 fadH2 fadH2 antB antB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylZToluate 1,2-dioxygenase electron transfer component; Product name confidence: Class 2 (High similarity to functionally studied protein). (337 aa)    
Predicted Functional Partners:
xylL
Cis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase; Product name confidence: Class 2 (High similarity to functionally studied protein).
 0.999
xylY
Toluate 1,2-dioxygenase beta subunit; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
 
 0.999
xylX
Toluate 1,2-dioxygenase alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
 
 0.998
catC
Muconolactone delta-isomerase; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
  
 0.961
nuoD
NADH dehydrogenase I chain C,D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
 
 0.940
catA
Catechol 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
  
 0.922
catB
Muconate cycloisomerase I; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.922
fadH1
2,4-dienoyl-CoA reductase FadH1; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
 0.919
fadH2
2,4-dienoyl-CoA reductase FadH2; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
 0.919
antB
Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
  
 0.911
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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