Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA2085 | antB | PA2085 | PA2513 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.536 |
| PA2085 | antC | PA2085 | PA2514 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.693 |
| PA2085 | catC | PA2085 | PA2508 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Muconolactone delta-isomerase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.476 |
| PA2085 | xylL | PA2085 | PA2515 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Cis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.477 |
| PA2085 | xylX | PA2085 | PA2518 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Toluate 1,2-dioxygenase alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.853 |
| PA2085 | xylY | PA2085 | PA2517 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Toluate 1,2-dioxygenase beta subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.523 |
| PA2085 | xylZ | PA2085 | PA2516 | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Toluate 1,2-dioxygenase electron transfer component; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.679 |
| antB | PA2085 | PA2513 | PA2085 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.536 |
| antB | antC | PA2513 | PA2514 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.999 |
| antB | catA | PA2513 | PA2507 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Catechol 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.973 |
| antB | catB | PA2513 | PA2509 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Muconate cycloisomerase I; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.933 |
| antB | catC | PA2513 | PA2508 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Muconolactone delta-isomerase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.987 |
| antB | pcaD | PA2513 | PA0231 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Beta-ketoadipate enol-lactone hydrolase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.712 |
| antB | xylL | PA2513 | PA2515 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Cis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.867 |
| antB | xylX | PA2513 | PA2518 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Toluate 1,2-dioxygenase alpha subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.949 |
| antB | xylZ | PA2513 | PA2516 | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Toluate 1,2-dioxygenase electron transfer component; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.911 |
| antC | PA2085 | PA2514 | PA2085 | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable ring-hydroxylating dioxygenase small subunit; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.693 |
| antC | antB | PA2514 | PA2513 | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.999 |
| antC | catA | PA2514 | PA2507 | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Catechol 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.979 |
| antC | catB | PA2514 | PA2509 | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Muconate cycloisomerase I; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.974 |
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