STRINGSTRING
pelG pelG pelF pelF pelE pelE pelD pelD pelC pelC pelA pelA pelB pelB pslO pslO pslA pslA pslJ pslJ alg44 alg44
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelGPelG; Class 1: Function experimentally demonstrated in P. aeruginosa. (456 aa)    
Predicted Functional Partners:
pelF
PelF; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.997
pelE
PelE; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.996
pelD
PelD; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.994
pelC
PelC; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.994
pelA
PelA; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.992
pelB
PelB; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.983
pslO
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
   
  
 0.768
pslA
PslA; Class 1: Function experimentally demonstrated in P. aeruginosa.
      
 0.597
pslJ
PslJ; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
   
  
 0.571
alg44
Alginate biosynthesis protein Alg44; Required for alginate biosynthesis. Belongs to the Alg44 family.
      
 0.495
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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