Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA0583 | folE1 | PA0583 | PA3438 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.766 |
| PA0583 | folE2 | PA0583 | PA1674 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.767 |
| PA0583 | folP | PA0583 | PA4750 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.991 |
| PA0583 | folX | PA0583 | PA3439 | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | D-erythro-7,8-dihydroneopterin triphosphate epimerase; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.797 |
| PA2666 | eddA | PA2666 | PA3910 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.900 |
| PA2666 | folE1 | PA2666 | PA3438 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.993 |
| PA2666 | folE2 | PA2666 | PA1674 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.995 |
| PA2666 | folE2-2 | PA2666 | PA5539 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.954 |
| PA2666 | folX | PA2666 | PA3439 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | D-erythro-7,8-dihydroneopterin triphosphate epimerase; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.920 |
| PA2666 | phoA | PA2666 | PA3296 | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Alkaline phosphatase; Has only phosphomonoesterase activity. Belongs to the alkaline phosphatase family. | 0.900 |
| eddA | PA2666 | PA3910 | PA2666 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.900 |
| eddA | folE1 | PA3910 | PA3438 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.917 |
| eddA | folE2 | PA3910 | PA1674 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.917 |
| eddA | folE2-2 | PA3910 | PA5539 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.900 |
| eddA | folX | PA3910 | PA3439 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | D-erythro-7,8-dihydroneopterin triphosphate epimerase; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.930 |
| eddA | phoA | PA3910 | PA3296 | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | Alkaline phosphatase; Has only phosphomonoesterase activity. Belongs to the alkaline phosphatase family. | 0.977 |
| folE1 | PA0583 | PA3438 | PA0583 | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.766 |
| folE1 | PA2666 | PA3438 | PA2666 | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable 6-pyruvoyl tetrahydrobiopterin synthase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.993 |
| folE1 | eddA | PA3438 | PA3910 | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | Extracelullar DNA degradation protein, EddA; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.917 |
| folE1 | folE2 | PA3438 | PA1674 | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | GTP cyclohydrolase I precursor; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.903 |
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