STRINGSTRING
fepD fepD fepC fepC fepB fepB fepG fepG PA2912 PA2912 hmuV hmuV phuT phuT PA4045 PA4045 PA2913 PA2913 exbD1 exbD1 pirA pirA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepDFerric enterobactin transport protein FepD; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)    
Predicted Functional Partners:
fepC
Ferric enterobactin transport protein FepC; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
 
 0.998
fepB
Ferrienterobactin-binding periplasmic protein precursor FepB; Product name confidence: Class 2 (High similarity to functionally studied protein).
 
  
 0.978
fepG
Ferric enterobactin transport protein FepG; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.960
PA2912
Probable ATP-binding component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 
 0.959
hmuV
Probable ATP-binding component of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.953
phuT
Heme-transport protein, PhuT; Class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known).
 
 
 0.937
PA4045
Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
 
 
 0.929
PA2913
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
 
 
 0.896
exbD1
Transport protein ExbD; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.
  
  
 0.732
pirA
Ferric enterobactin receptor PirA; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
  
  
 0.696
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.