STRINGSTRING
PA5075 PA5075 PA5074 PA5074 PA5076 PA5076 aotJ aotJ PA0314 PA0314 PA4192 PA4192 PA5153 PA5153 PA1339 PA1339 PA1256 PA1256 PA3865 PA3865 PA4195 PA4195
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PA5075Probable permease of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). (320 aa)    
Predicted Functional Partners:
PA5074
Probable ATP-binding component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.986
PA5076
Probable binding protein component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene); Belongs to the bacterial solute-binding protein 3 family.
 
 0.968
aotJ
Arginine/ornithine binding protein AotJ; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa); Belongs to the bacterial solute-binding protein 3 family.
 
 0.907
PA0314
L-cysteine transporter of ABC system FliY; Class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene; Belongs to the bacterial solute-binding protein 3 family.
 
 0.902
PA4192
Probable ATP-binding component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.900
PA5153
Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa; Belongs to the bacterial solute-binding protein 3 family.
 
 0.899
PA1339
Amino acid ABC transporter ATP binding protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
 0.898
PA1256
Amino acid ABC transporter ATP binding protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
 0.891
PA3865
Probable amino acid binding protein; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.882
PA4195
Probable binding protein component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene); Belongs to the bacterial solute-binding protein 3 family.
 
 0.837
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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