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PA5152 PA5152 PA5153 PA5153 PA5154 PA5154 PA5155 PA5155 PA3934 PA3934 braZ braZ PA1113 PA1113 hisM hisM aotM aotM aotQ aotQ hisQ hisQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PA5152Probable ATP-binding component of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). (257 aa)    
Predicted Functional Partners:
PA5153
Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.999
PA5154
Probable permease of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.991
PA5155
Amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
 0.989
PA3934
Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
   
  
 0.884
braZ
Branched chain amino acid transporter BraZ; Component of the LIV-III transport system for branched-chain amino acids. BraZ is specific for isoleucine and valine. The LIV-III transport system may be H(+)-coupled.
      
 0.882
PA1113
Probable ATP-binding/permease fusion ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
     
0.877
hisM
Histidine transport system permease HisM; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
 0.855
aotM
Arginine/ornithine transport protein AotM; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
  
 0.854
aotQ
Arginine/ornithine transport protein AotQ; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
 
  
 0.842
hisQ
Histidine transport system permease HisQ; Product name confidence: Class 2 (High similarity to functionally studied protein).
  
 0.835
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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