STRINGSTRING
AEF24406.1 AEF24406.1 AEF24404.1 AEF24404.1 AEF24405.1 AEF24405.1 AEF24401.1 AEF24401.1 AEF24402.1 AEF24402.1 AEF24400.1 AEF24400.1 AEF24403.1 AEF24403.1 AEF24407.1 AEF24407.1 AEF24397.1 AEF24397.1 AEF24420.1 AEF24420.1 AEF24419.1 AEF24419.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF24406.1TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain; KEGG: pfs:PFLU0648 hypothetical protein; SMART: SAF domain. (316 aa)    
Predicted Functional Partners:
AEF24404.1
KEGG: pfl:PFL_0696 hypothetical protein.
 
  
 0.991
AEF24405.1
PFAM: Type II/III secretion system; KEGG: psb:Psyr_4391 type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.989
AEF24401.1
PFAM: Type II secretion system F domain; KEGG: pfs:PFLU0643 hypothetical protein.
 
  
 0.988
AEF24402.1
PFAM: Type II secretion system F domain; KEGG: pfs:PFLU0644 hypothetical protein.
 
  
 0.988
AEF24400.1
KEGG: pfs:PFLU0642 putative lipoprotein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
 
  
 0.961
AEF24403.1
PFAM: Type II secretion system protein E; KEGG: ppw:PputW619_0846 type II secretion system protein E.
 
  
 0.957
AEF24407.1
PFAM: Flp/Fap pilin component; KEGG: rso:RS02598 putative pilin protein.
 
  
 0.918
AEF24397.1
PFAM: Peptidase A24A, prepilin type IV; KEGG: pfo:Pfl01_0639 peptidase A24A, prepilin type IV.
  
  
 0.863
AEF24420.1
KEGG: smt:Smal_2328 membrane protein-like protein.
 
  
 0.843
AEF24419.1
TadE family protein; PFAM: TadE-like; KEGG: pag:PLES_46741 putative pilus assembly protein.
  
  
 0.820
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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