STRINGSTRING
EIJ33720.1 EIJ33720.1 EIJ33719.1 EIJ33719.1 EIJ33721.1 EIJ33721.1 EIJ33308.1 EIJ33308.1 EIJ33649.1 EIJ33649.1 EIJ34936.1 EIJ34936.1 EIJ34937.1 EIJ34937.1 EIJ33075.1 EIJ33075.1 EIJ35563.1 EIJ35563.1 EIJ36295.1 EIJ36295.1 EIJ34326.1 EIJ34326.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EIJ33720.1PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; COGs: COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis; HAMAP: Outer-membrane lipoprotein lolB; InterPro IPR004565; KEGG: pfs:PFLU0734 outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB; SPTR: Outer-membrane lipoprotein lolB; TIGRFAM: Outer membrane lipoprotein LolB. (209 aa)    
Predicted Functional Partners:
EIJ33719.1
PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR006204:IPR013750:IPR004424; KEGG: aeh:Mlg_0282 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
  
    0.837
EIJ33721.1
InterPro IPR001440:IPR013105:IPR019734; KEGG: tgr:Tgr7_0524 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein.
 
   
 0.815
EIJ33308.1
DNA topoisomerase IV, A subunit; PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005742:IPR002205:IPR006691; KEGG: tgr:Tgr7_2119 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA topoisomerase (ATP-hydrolyzing); [...]
  
    0.773
EIJ33649.1
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
    0.763
EIJ34936.1
PFAM: HemY protein N-terminus; TIGRFAM: hemY protein; COGs: COG3071 Uncharacterized protein of heme biosynthesis; InterPro IPR010817; KEGG: tgr:Tgr7_0026 HemY-like protein; PFAM: HemY, N-terminal; SPTR: HemY domain protein.
 
     0.696
EIJ34937.1
hemX domain protein; PFAM: HemX; COGs: COG2959 Uncharacterized protein of heme biosynthesis; InterPro IPR007470; KEGG: tgr:Tgr7_0027 hypothetical protein; PFAM: HemX; SPTR: Uroporphyrinogen III methylase.
  
     0.676
EIJ33075.1
PFAM: Predicted periplasmic protein (DUF2092); Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; COGs: COG2834 Outer membrane lipoprotein-sorting protein; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; InterPro IPR004564:IPR018323; KEGG: tgr:Tgr7_2003 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: Outer-membrane lipoprotein carrier protein; TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria.
  
 
 
 0.623
EIJ35563.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: tgr:Tgr7_2139 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; overlaps another CDS with the same product name.
  
   
 0.617
EIJ36295.1
Cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; COGs: COG3115 Cell division protein; InterPro IPR007449:IPR011919; KEGG: tgr:Tgr7_2025 cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; SMART: ZipA, C-terminal FtsZ-binding region; SPTR: Cell division protein zipA; TIGRFAM: Cell division protein ZipA.
  
     0.597
EIJ34326.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: tgr:Tgr7_0512 rod shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; SPTR: Rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD.
  
   
 0.578
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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