STRINGSTRING
xylB xylB xylA xylA Cwoe_2979 Cwoe_2979 Cwoe_3986 Cwoe_3986 Cwoe_3720 Cwoe_3720 Cwoe_1260 Cwoe_1260 Cwoe_1027 Cwoe_1027 Cwoe_1267 Cwoe_1267 Cwoe_0564 Cwoe_0564 Cwoe_0103 Cwoe_0103 Cwoe_4813 Cwoe_4813
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBTIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: pfs:PFLU2740 xylulose kinase. (482 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; KEGG: similar to predicted protein; K01805 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.996
Cwoe_2979
PFAM: Carbohydrate kinase, FGGY-like; KEGG: bcj:BCAL2818 putative sugar kinase protein.
 
  
 
0.932
Cwoe_3986
PFAM: Carbohydrate kinase, FGGY-like; KEGG: hch:HCH_02472 sugar (pentulose and hexulose) kinase; Belongs to the FGGY kinase family.
 
  
 
0.924
Cwoe_3720
KEGG: afw:Anae109_0447 ribulose-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.921
Cwoe_1260
PFAM: ROK family protein; KEGG: mxa:MXAN_6549 ROK family transcriptional regulator.
 
  
 0.813
Cwoe_1027
PFAM: protein of unknown function DUF718; KEGG: msu:MS2324 hypothetical protein.
 
  
 0.713
Cwoe_1267
PFAM: Aldose 1-epimerase; KEGG: esa:ESA_04055 hypothetical protein.
 
  
 0.665
Cwoe_0564
PFAM: protein of unknown function DUF718; KEGG: vei:Veis_2123 hypothetical protein.
  
  
 0.630
Cwoe_0103
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.617
Cwoe_4813
L-fucose isomerase-like protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
 0.555
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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