STRINGSTRING
AEM47117.1 AEM47117.1 AEM47118.1 AEM47118.1 AEM47115.1 AEM47115.1 AEM47116.1 AEM47116.1 AEM47119.1 AEM47119.1 AEM49185.1 AEM49185.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM47117.1DinB family protein; PFAM: DinB; KEGG: pfs:PFLU2952 hypothetical protein. (180 aa)    
Predicted Functional Partners:
AEM47118.1
KEGG: afe:Lferr_2023 transposase IS3/IS911 family protein.
       0.543
AEM47115.1
PFAM: Uncharacterised protein family UPF0150; KEGG: app:CAP2UW1_2579 hypothetical protein.
       0.533
AEM47116.1
YcfA family protein; PFAM: YcfA-like; KEGG: app:CAP2UW1_2578 YcfA family protein.
       0.533
AEM47119.1
KEGG: sbl:Sbal_4350 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core.
       0.495
AEM49185.1
PFAM: NADPH-dependent FMN reductase; KEGG: afr:AFE_2803 FMN reductase, NADPH-dependent.
  
     0.427
Your Current Organism:
Acidithiobacillus ferrivorans
NCBI taxonomy Id: 743299
Other names: A. ferrivorans SS3, Acidithiobacillus ferrivorans SS3, Acidithiobacillus ferrivorans str. SS3, Acidithiobacillus ferrivorans strain SS3
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