STRINGSTRING
AEI38422.1 AEI38422.1 AEI38423.1 AEI38423.1 AEI38421.1 AEI38421.1 AEI38420.1 AEI38420.1 AEI38156.1 AEI38156.1 pth pth AEI37782.1 AEI37782.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AEI38422.1PFAM: regulatory protein TetR; KEGG: pfs:PFLU4288 TetR-family regulatory protein. (235 aa)    
Predicted Functional Partners:
AEI38423.1
PFAM: major facilitator superfamily MFS_1; KEGG: pfs:PFLU4287 transport-related membrane protein.
 
     0.736
AEI38421.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfs:PFLU4800 short chain dehydrogenase.
 
     0.690
AEI38420.1
PFAM: Polyketide cyclase/dehydrase; KEGG: mlo:mlr1698 hypothetical protein.
 
     0.605
AEI38156.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_0141 LysR family transcriptional regulator.
  
 
   0.512
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.426
AEI37782.1
KEGG: pla:Plav_3015 AraC-like transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.423
Your Current Organism:
Zymomonas mobilis pomaceae
NCBI taxonomy Id: 579138
Other names: Z. mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae str. ATCC 29192, Zymomonas mobilis subsp. pomaceae strain ATCC 29192
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