STRINGSTRING
AEF20089.1 AEF20089.1 AEF20090.1 AEF20090.1 dksA dksA folE2 folE2 AEF20093.1 AEF20093.1 rpsN rpsN AEF22575.1 AEF22575.1 AEF20656.1 AEF20656.1 rpmG rpmG rpmB rpmB AEF20044.1 AEF20044.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF20089.1KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. (400 aa)    
Predicted Functional Partners:
AEF20090.1
PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein.
 
  
 0.985
dksA
Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.
  
  
 0.942
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.916
AEF20093.1
PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: pmy:Pmen_4533 cobalamin synthesis protein, P47K.
 
   
0.721
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.636
AEF22575.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pfs:PFLU5369 hypothetical protein.
   
   0.555
AEF20656.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_3864 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
  
 0.554
rpmG
TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: pen:PSEEN5426 50S ribosomal protein L33; PFAM: Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
 
  
 0.505
rpmB
TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: ppw:PputW619_0188 50S ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.501
AEF20044.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: pmy:Pmen_4570 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole methylase.
     
 0.500
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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