STRINGSTRING
tag_2 tag_2 ogt ogt PFL_0016 PFL_0016 polA polA glyS glyS glyQ glyQ gmhB gmhB PFL_0017 PFL_0017 alkA alkA PFL_0011 PFL_0011 PFL_0379 PFL_0379
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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tag_2DNA-3-methyladenine glycosylase I; Identified by similarity to SP:P05100; match to protein family HMM PF03352; match to protein family HMM TIGR00624. (187 aa)    
Predicted Functional Partners:
ogt
methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
   
 0.747
PFL_0016
Putative lipid A biosynthesis lauroyl acyltransferase; Identified by similarity to SP:P24187; match to protein family HMM PF03279.
  
  
 0.724
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.646
glyS
glycine--tRNA ligase, beta subunit; Identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.
       0.608
glyQ
glycine--tRNA ligase, alpha subunit; Identified by similarity to SP:P00960; match to protein family HMM PF02091; match to protein family HMM TIGR00388.
       0.608
gmhB
Putative D,D-heptose 1,7-bisphosphate phosphatase; Identified by similarity to SP:P63228; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
       0.584
PFL_0017
Conserved hypothetical protein; Identified by match to protein family HMM PF07238.
     
 0.563
alkA
DNA-3-methyladenine glycosylase II; Identified by similarity to SP:P04395; match to protein family HMM PF00730; match to protein family HMM PF06029.
     
 0.473
PFL_0011
Putative acylhomoserine lactone synthase HdtS; Identified by similarity to GB:AAG30826.1; match to protein family HMM PF01553.
       0.466
PFL_0379
methylated-DNA-[protein]-cysteine S-methyltransferase, ADA family; Identified by similarity to SP:P06134; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589.
 
   
 0.434
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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