STRINGSTRING
PFL_0017 PFL_0017 PFL_0016 PFL_0016 tag_2 tag_2 glyS glyS glyQ glyQ gmhB gmhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_0017Conserved hypothetical protein; Identified by match to protein family HMM PF07238. (79 aa)    
Predicted Functional Partners:
PFL_0016
Putative lipid A biosynthesis lauroyl acyltransferase; Identified by similarity to SP:P24187; match to protein family HMM PF03279.
  
  
 0.679
tag_2
DNA-3-methyladenine glycosylase I; Identified by similarity to SP:P05100; match to protein family HMM PF03352; match to protein family HMM TIGR00624.
     
 0.563
glyS
glycine--tRNA ligase, beta subunit; Identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.
       0.429
glyQ
glycine--tRNA ligase, alpha subunit; Identified by similarity to SP:P00960; match to protein family HMM PF02091; match to protein family HMM TIGR00388.
       0.429
gmhB
Putative D,D-heptose 1,7-bisphosphate phosphatase; Identified by similarity to SP:P63228; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
       0.416
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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