node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PFL_1106 | PFL_1775 | PFL_1106 | PFL_1775 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | 0.624 |
PFL_1106 | PFL_5694 | PFL_1106 | PFL_5694 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | ComF family protein. | 0.699 |
PFL_1106 | PFL_6022 | PFL_1106 | PFL_6022 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Mg-chelatase subunits D/I family, ComM subfamily protein; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368. | 0.535 |
PFL_1106 | dprA | PFL_1106 | PFL_0024 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. | 0.607 |
PFL_1106 | pilD | PFL_1106 | PFL_5289 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.436 |
PFL_1106 | recA | PFL_1106 | PFL_1231 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.707 |
PFL_1775 | PFL_1106 | PFL_1775 | PFL_1106 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | 0.624 |
PFL_1775 | PFL_5694 | PFL_1775 | PFL_5694 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | ComF family protein. | 0.858 |
PFL_1775 | PFL_6022 | PFL_1775 | PFL_6022 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | Mg-chelatase subunits D/I family, ComM subfamily protein; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368. | 0.569 |
PFL_1775 | dprA | PFL_1775 | PFL_0024 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. | 0.893 |
PFL_1775 | pilD | PFL_1775 | PFL_5289 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.826 |
PFL_1775 | recA | PFL_1775 | PFL_1231 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.654 |
PFL_1775 | recG | PFL_1775 | PFL_6071 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.601 |
PFL_1775 | ssb | PFL_1775 | PFL_5552 | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.543 |
PFL_5694 | PFL_1106 | PFL_5694 | PFL_1106 | ComF family protein. | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | 0.699 |
PFL_5694 | PFL_1775 | PFL_5694 | PFL_1775 | ComF family protein. | DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361. | 0.858 |
PFL_5694 | PFL_6022 | PFL_5694 | PFL_6022 | ComF family protein. | Mg-chelatase subunits D/I family, ComM subfamily protein; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368. | 0.853 |
PFL_5694 | dprA | PFL_5694 | PFL_0024 | ComF family protein. | DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. | 0.917 |
PFL_5694 | recA | PFL_5694 | PFL_1231 | ComF family protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.606 |
PFL_5694 | recG | PFL_5694 | PFL_6071 | ComF family protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.410 |