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qor_2 qor_2 PFL_2274 PFL_2274 pltC pltC rzxA rzxA hemF hemF PFL_4656 PFL_4656 pltB pltB rzxD rzxD aroE aroE
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
qor_2NADPH:quinone reductase; Identified by similarity to SP:P28304; match to protein family HMM PF00107; match to protein family HMM PF08240. (325 aa)    
Predicted Functional Partners:
PFL_2274
Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
 
     0.675
pltC
Polyketide synthase PltC; Previously identified and sequenced (PMID: 9434161 Nowak-Thompson et al. 1997); identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659.
 
 
 0.637
rzxA
Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.
  
 
 0.608
hemF
Coproporphyrinogen III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.546
PFL_4656
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.
  
  
 0.540
pltB
Polyketide synthase PltB; Previously identified and sequenced (PMID: 9434161 Nowak-Thompson et al. 1997); identified by similarity to GB:AAQ90173.1; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
 
 0.535
rzxD
Polyketide synthase RzxD; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM PF08659.
 
 
 0.425
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.413
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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