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metQ2 metQ2 metN2 metN2 metI2 metI2 metI1 metI1 PFL_4166 PFL_4166 metN1 metN1 metN3 metN3 cysD cysD cysN cysN cysNC cysNC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
metQ2D-methionine ABC transporter, periplasmic methionine-binding lipoprotein MetQ; Protein identified by sequence similarity to MetQ in E. coli. (Swiss-Prot: P28635); identified by match to protein family HMM PF03180. (257 aa)    
Predicted Functional Partners:
metN2
D-methionine ABC transporter, ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.996
metI2
D-methionine ABC transporter, permease protein MetI; Identified by similarity to SP:P31547; match to protein family HMM PF00528.
 0.994
metI1
D-methionine ABC transporter, permease protein MetI; Identified by similarity to SP:P31547; match to protein family HMM PF00528.
 0.985
PFL_4166
Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 0.985
metN1
D-methionine ABC transporter, ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.983
metN3
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.983
cysD
O-acetylhomoserine sulfhydrylase; Identified by similarity to SP:O13326; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326.
  
    0.483
cysN
Putative sulfate adenylyltransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.461
cysNC
Sulfate adenylyltransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
  
 0.461
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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