PFL_0127 protein (Pseudomonas protegens) - STRING interaction network

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PFL_0127

RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)

Predicted Functional Partners:

PFL_0126

0.964

PFL_5705

0.822

PFL_0146

0.821

PFL_2292

0.821

PFL_2364

0.821

PFL_3314

0.821

pupR

0.819

PFL_2392

0.817

fecR

0.816

PFL_0989

0.816

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0126	PFL_0127	PFL_0126	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.964
PFL_0127	PFL_0126	PFL_0127	PFL_0126	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; match to protein family HMM PF04773.	0.964
PFL_0127	PFL_0146	PFL_0127	PFL_0146	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.821
PFL_0127	PFL_0989	PFL_0127	PFL_0989	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.816
PFL_0127	PFL_2292	PFL_0127	PFL_2292	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.821
PFL_0127	PFL_2364	PFL_0127	PFL_2364	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.821
PFL_0127	PFL_2392	PFL_0127	PFL_2392	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by match to protein family HMM PF04773.	0.817
PFL_0127	PFL_3314	PFL_0127	PFL_3314	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.821
PFL_0127	PFL_5705	PFL_0127	PFL_5705	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.822
PFL_0127	fecR	PFL_0127	PFL_0983	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.816
PFL_0127	pupR	PFL_0127	PFL_2528	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein PupR; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.819
PFL_0146	PFL_0127	PFL_0146	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.821
PFL_0989	PFL_0127	PFL_0989	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.816
PFL_0989	fecR	PFL_0989	PFL_0983	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.621
PFL_2292	PFL_0127	PFL_2292	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.821
PFL_2364	PFL_0127	PFL_2364	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.821
PFL_2392	PFL_0127	PFL_2392	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.817
PFL_3314	PFL_0127	PFL_3314	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.821
PFL_5705	PFL_0127	PFL_5705	PFL_0127	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.822
fecR	PFL_0127	PFL_0983	PFL_0127	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.816

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