STRINGSTRING
atsB atsB atsC atsC atsR atsR PFL_2552 PFL_2552 ssuA ssuA PFL_1382 PFL_1382 PFL_1387 PFL_1387 ssuB2 ssuB2 PFL_2924 PFL_2924 ssuB ssuB tauB tauB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsBSulfate ester ABC transporter, permease protein AtsB; Identified by similarity to GB:AAD31786.2; match to protein family HMM PF00528. (531 aa)    
Predicted Functional Partners:
atsC
Sulfate ester ABC transporter, ATP-binding protein AtsC; Identified by similarity to GB:AAD31787.1; match to protein family HMM PF00005.
 
 
 0.992
atsR
Sulfate ester ABC transporter, periplasmic sulfate ester-binding protein AtsR; Identified by similarity to GB:AAD31785.1; match to protein family HMM PF09084.
 
 
 0.980
PFL_2552
ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR01728.
 
 
 0.968
ssuA
Aliphatic sulfonates ABC transporter, periplasmic sulfonate-binding protein; Identified by similarity to GB:AAC31904.1; match to protein family HMM PF04069; match to protein family HMM TIGR01728.
 
 
 0.968
PFL_1382
ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; Identified by match to protein family HMM TIGR01409.
 
 
 0.967
PFL_1387
Alkanesulfonate ABC transporter, periplasmic substrate-binding protein; Identified by similarity to SP:P75853; match to protein family HMM TIGR01728.
 
 
 0.967
ssuB2
Aliphatic sulfonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.966
PFL_2924
Conserved hypothetical protein.
 
 
 0.965
ssuB
Aliphatic sulfonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.964
tauB
Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
  
 0.911
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.