STRINGSTRING
eutH_2 eutH_2 eutA eutA eutC eutC eutBC eutBC eutB eutB PFL_0504 PFL_0504 rlmJ rlmJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eutH_2Ethanolamine utilization protein EutH; Identified by similarity to SP:P76552; match to protein family HMM PF04346. (411 aa)    
Predicted Functional Partners:
eutA
Ethanolamine utilization protein EutA; Identified by similarity to SP:Q9ZFV2.
 
  
 0.820
eutC
Ethanolamine ammonia-lyase, light subunit; Identified by match to protein family HMM PF05985; Belongs to the EutC family.
 
  
 0.776
eutBC
Ethanolamine ammonia-lyase; Identified by similarity to SP:P19635; similarity to SP:P19636; match to protein family HMM PF06751.
 
  
 0.774
eutB
Ethanolamine ammonia-lyase, large subunit; Identified by similarity to SP:P19635; match to protein family HMM PF06751.
 
  
 0.727
PFL_0504
Conserved hypothetical protein; Identified by match to protein family HMM PF09152.
       0.659
rlmJ
Conserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.447
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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