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PFL_0711 PFL_0711 PFL_0710 PFL_0710 PFL_0712 PFL_0712 cueR cueR PFL_0713 PFL_0713
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_0711Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
PFL_0710
Copper-exporting ATPase; Identified by similarity to SP:P73241; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
       0.589
PFL_0712
Putative copper chaperone CopZ; Identified by similarity to SP:O32221; match to protein family HMM PF00403.
       0.585
cueR
Cu(I)-responsive transcriptional regulator; Identified by similarity to SP:P0A9G4; match to protein family HMM PF00376; match to protein family HMM PF09278; match to protein family HMM TIGR02044.
       0.512
PFL_0713
Drug resistance transporter, Bcr/CflA family; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710.
       0.448
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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