PFL_0988 protein (Pseudomonas protegens) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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PFL_0988

RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa)

Predicted Functional Partners:

PFL_0989

0.956

fecR

0.876

PFL_4626

0.809

PFL_3611

0.806

PFL_0986

0.805

PFL_2392

0.802

PFL_4040

0.799

fpvR

0.798

PFL_0985

0.797

PFL_0987

0.796

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0985	PFL_0986	PFL_0985	PFL_0986	Conserved hypothetical protein.	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	0.958
PFL_0985	PFL_0987	PFL_0985	PFL_0987	Conserved hypothetical protein.	Conserved hypothetical protein.	0.987
PFL_0985	PFL_0988	PFL_0985	PFL_0988	Conserved hypothetical protein.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.797
PFL_0985	PFL_0989	PFL_0985	PFL_0989	Conserved hypothetical protein.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.800
PFL_0985	fecR	PFL_0985	PFL_0983	Conserved hypothetical protein.	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.583
PFL_0986	PFL_0985	PFL_0986	PFL_0985	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	Conserved hypothetical protein.	0.958
PFL_0986	PFL_0987	PFL_0986	PFL_0987	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	Conserved hypothetical protein.	0.959
PFL_0986	PFL_0988	PFL_0986	PFL_0988	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.805
PFL_0986	PFL_0989	PFL_0986	PFL_0989	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.812
PFL_0986	fecR	PFL_0986	PFL_0983	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.622
PFL_0987	PFL_0985	PFL_0987	PFL_0985	Conserved hypothetical protein.	Conserved hypothetical protein.	0.987
PFL_0987	PFL_0986	PFL_0987	PFL_0986	Conserved hypothetical protein.	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	0.959
PFL_0987	PFL_0988	PFL_0987	PFL_0988	Conserved hypothetical protein.	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.796
PFL_0987	PFL_0989	PFL_0987	PFL_0989	Conserved hypothetical protein.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.799
PFL_0987	fecR	PFL_0987	PFL_0983	Conserved hypothetical protein.	Sigma factor regulatory protein FecR; Identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773.	0.648
PFL_0988	PFL_0985	PFL_0988	PFL_0985	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.797
PFL_0988	PFL_0986	PFL_0988	PFL_0986	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03929.	0.805
PFL_0988	PFL_0987	PFL_0988	PFL_0987	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.796
PFL_0988	PFL_0989	PFL_0988	PFL_0989	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by similarity to PIR:S46356; match to protein family HMM PF04773.	0.956
PFL_0988	PFL_2392	PFL_0988	PFL_2392	RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Sigma factor regulatory protein, FecR/PupR family; Identified by match to protein family HMM PF04773.	0.802

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