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algE algE algK algK algL algL algX algX algG algG alg44 alg44 algF algF algI algI PFL_1023 PFL_1023 PFL_1015 PFL_1015 algA algA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
algEAlginate biosynthesis protein AlgE; Identified by similarity to SP:P18895. (534 aa)    
Predicted Functional Partners:
algK
Alginate biosynthesis protein AlgK; Identified by similarity to GB:AAC38141.1; match to protein family HMM PF08238.
  
  
 0.973
algL
Alginate lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism. May serve to degrade mislocalized alginate that is trapped in the periplasmic space.
  
  
 0.958
algX
Alginate biosynthesis protein AlgX; Identified by similarity to GB:AAA91126.1.
  
  
 0.958
algG
poly(beta-D-mannuronate) C5 epimerase AlgG; Identified by similarity to SP:Q51371.
  
  
 0.945
alg44
Alginate biosynthesis protein Alg44; Identified by similarity to SP:Q9HY69; match to protein family HMM PF07238.
  
  
 0.942
algF
Alginate biosynthesis protein AlgF; Identified by similarity to SP:Q06062.
  
  
 0.888
algI
Alginate biosynthesis protein AlgI; Identified by similarity to GB:AAB09781.1; match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
  
  
 0.884
PFL_1023
Alginate biosynthesis protein Alg8; Identified by similarity to SP:Q52463.
  
  
 0.863
PFL_1015
Alginate biosynthesis protein AlgJ; Identified by similarity to SP:O52197.
  
  
 0.835
algA
Alginate biosynthesis protein AlgA; Identified by similarity to SP:P07874; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.816
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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