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PFL_1233 PFL_1233 sdhB sdhB poxB poxB yneI yneI sdhC sdhC sdhA sdhA wapP wapP
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_1233Conserved hypothetical protein; Identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730. (372 aa)    
Predicted Functional Partners:
sdhB
Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P07014; match to protein family HMM TIGR00384.
    
  0.510
poxB
Pyruvate dehydrogenase (cytochrome); Identified by similarity to SP:P07003; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
  
 
  0.501
yneI
Succinate semialdehyde dehydrogenase, NAD+-dependent; Identified by similarity to SP:P76149; match to protein family HMM PF00171.
    
  0.500
sdhC
Succinate dehydrogenase, cytochrome b556 subunit; Identified by similarity to SP:P10446; match to protein family HMM PF01127; match to protein family HMM TIGR02970.
     
  0.499
sdhA
Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P10444; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
  0.499
wapP
Putative heptose kinase WapP; Identified by similarity to GB:AAG08393.1; match to protein family HMM PF06293.
  
     0.478
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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