Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PFL_1255 | PFL_1257 | PFL_1255 | PFL_1257 | Putative lipoprotein. | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | 0.538 |
| PFL_1255 | proS | PFL_1255 | PFL_1256 | Putative lipoprotein. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | 0.776 |
| PFL_1255 | ybaZ | PFL_1255 | PFL_1258 | Putative lipoprotein. | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | 0.476 |
| PFL_1257 | PFL_1255 | PFL_1257 | PFL_1255 | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | Putative lipoprotein. | 0.538 |
| PFL_1257 | proS | PFL_1257 | PFL_1256 | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | 0.558 |
| PFL_1257 | ybaZ | PFL_1257 | PFL_1258 | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | 0.685 |
| proS | PFL_1255 | PFL_1256 | PFL_1255 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | Putative lipoprotein. | 0.776 |
| proS | PFL_1257 | PFL_1256 | PFL_1257 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | 0.558 |
| proS | ybaZ | PFL_1256 | PFL_1258 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | 0.492 |
| ybaZ | PFL_1255 | PFL_1258 | PFL_1255 | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | Putative lipoprotein. | 0.476 |
| ybaZ | PFL_1257 | PFL_1258 | PFL_1257 | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | AmpG-like permease; Identified by similarity to SP:P0AE16; match to protein family HMM PF07690. | 0.685 |
| ybaZ | proS | PFL_1258 | PFL_1256 | DNA base-flipping protein YbaZ; Identified by similarity to SP:P0AFP2; match to protein family HMM PF01035. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] | 0.492 |