Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PFL_1271 | PFL_1272 | SEC-C domain protein; Identified by match to protein family HMM PF02810. | Conserved hypothetical protein. | 0.802 |
PFL_1271 | PFL_1273 | SEC-C domain protein; Identified by match to protein family HMM PF02810. | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | 0.676 |
PFL_1271 | PFL_1274 | SEC-C domain protein; Identified by match to protein family HMM PF02810. | Conserved hypothetical protein. | 0.638 |
PFL_1271 | PFL_1275 | SEC-C domain protein; Identified by match to protein family HMM PF02810. | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | 0.469 |
PFL_1272 | PFL_1271 | Conserved hypothetical protein. | SEC-C domain protein; Identified by match to protein family HMM PF02810. | 0.802 |
PFL_1272 | PFL_1273 | Conserved hypothetical protein. | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | 0.638 |
PFL_1272 | PFL_1274 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.821 |
PFL_1272 | PFL_1275 | Conserved hypothetical protein. | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | 0.469 |
PFL_1273 | PFL_1271 | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | SEC-C domain protein; Identified by match to protein family HMM PF02810. | 0.676 |
PFL_1273 | PFL_1272 | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | Conserved hypothetical protein. | 0.638 |
PFL_1273 | PFL_1274 | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | Conserved hypothetical protein. | 0.810 |
PFL_1273 | PFL_1275 | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | 0.542 |
PFL_1274 | PFL_1271 | Conserved hypothetical protein. | SEC-C domain protein; Identified by match to protein family HMM PF02810. | 0.638 |
PFL_1274 | PFL_1272 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.821 |
PFL_1274 | PFL_1273 | Conserved hypothetical protein. | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | 0.810 |
PFL_1274 | PFL_1275 | Conserved hypothetical protein. | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | 0.550 |
PFL_1275 | PFL_1271 | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | SEC-C domain protein; Identified by match to protein family HMM PF02810. | 0.469 |
PFL_1275 | PFL_1272 | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | Conserved hypothetical protein. | 0.469 |
PFL_1275 | PFL_1273 | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | SEC-C domain protein; Identified by match to protein family HMM PF02810; Belongs to the UPF0225 family. | 0.542 |
PFL_1275 | PFL_1274 | OmpA family lipoprotein; Identified by match to protein family HMM PF00691. | Conserved hypothetical protein. | 0.550 |