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PFL_1285 PFL_1285 yaeT yaeT PFL_5155 PFL_5155 PFL_4231 PFL_4231 PFL_1458 PFL_1458 PFL_1284 PFL_1284 inaA inaA PFL_2906 PFL_2906 oprF oprF PFL_0526 PFL_0526 PFL_0516 PFL_0516
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_1285Surface antigen protein, Rickettsia 17 kDa family; Identified by similarity to SP:P31484; match to protein family HMM PF05433. (154 aa)    
Predicted Functional Partners:
yaeT
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.673
PFL_5155
Lipid A 3-O-deacylase, PagL; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
  
 0.606
PFL_4231
Conserved hypothetical protein; Identified by match to protein family HMM PF05957.
  
    0.567
PFL_1458
Putative lipoprotein.
  
  
 0.535
PFL_1284
Conserved hypothetical protein.
       0.531
inaA
InaA protein; Identified by similarity to SP:P27294; match to protein family HMM PF06293.
  
     0.518
PFL_2906
Conserved hypothetical protein; Identified by match to protein family HMM PF05957.
  
  
 0.494
oprF
Outer membrane porin OprF; Identified by similarity to SP:P13794; match to protein family HMM PF00691; match to protein family HMM PF02462; match to protein family HMM PF05736.
  
  
 0.475
PFL_0526
O-antigen polymerase family protein/toluene tolerance protein; Identified by similarity to GB:AAD17955.1; match to protein family HMM PF04932.
  
     0.474
PFL_0516
Lipopolysaccharide kinase, WaaP family; Identified by match to protein family HMM PF06293.
  
     0.470
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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