STRINGSTRING
PFL_1338 PFL_1338 coaA coaA coaD coaD mazG mazG coaBC coaBC PFL_1337 PFL_1337 PFL_1336 PFL_1336 xenB xenB PFL_1547 PFL_1547 PFL_3663 PFL_3663
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_1338Conserved hypothetical protein; Identified by match to protein family HMM PF04336. (193 aa)    
Predicted Functional Partners:
coaA
Pantothenate kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00554.
     
 0.911
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
     
 0.905
mazG
Nucleoside triphosphate pyrophosphohydrolase; Identified by similarity to SP:P0AEY3; match to protein family HMM PF01503; match to protein family HMM PF03819; match to protein family HMM TIGR00444.
     
  0.900
coaBC
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
     
  0.900
PFL_1337
Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022.
       0.582
PFL_1336
Transporter, major facilitator family; Identified by match to protein family HMM PF07690.
       0.514
xenB
Xenobiotic reductase B; Identified by similarity to GB:AAF02539.1; match to protein family HMM PF00724.
       0.470
PFL_1547
Transporter, 10 TMS drug/metabolite exporter (DME) family; Identified by match to protein family HMM PF00892.
  
     0.439
PFL_3663
Conserved hypothetical protein.
 
     0.407
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.