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PFL_1396 PFL_1396 tpiA tpiA fba fba PFL_1395 PFL_1395 PFL_2651 PFL_2651 PFL_1397 PFL_1397 metH metH mtnA mtnA mtnD mtnD PFL_4883 PFL_4883 pltC pltC
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
PFL_1396Class II aldolase and adducin family protein; Identified by match to protein family HMM PF00596. (260 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.920
fba
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
  
 
 0.914
PFL_1395
Identified by match to protein family HMM PF00701; Belongs to the DapA family.
 
  
 0.864
PFL_2651
HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
    0.666
PFL_1397
DNA-binding domain/cupin domain protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
 
   
 0.655
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.578
mtnA
S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
  
 0.499
mtnD
ARD/ARD' family protein; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
  
  
 0.448
PFL_4883
Putative 2,3-diketo-5-methylthio-1-phosphopentane phosphatase.
  
  
 0.422
pltC
Polyketide synthase PltC; Previously identified and sequenced (PMID: 9434161 Nowak-Thompson et al. 1997); identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659.
  
  
 0.410
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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