STRINGSTRING
PFL_1452 PFL_1452 ttg2D ttg2D lptD lptD PFL_1453 PFL_1453 PFL_0316 PFL_0316 yaeT yaeT PFL_1458 PFL_1458 PFL_1454 PFL_1454 PFL_5161 PFL_5161 PFL_5132 PFL_5132 PFL_1792 PFL_1792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_1452Peptidase, M48 family; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. (477 aa)    
Predicted Functional Partners:
ttg2D
Toluene tolerance protein Ttg2D; Identified by similarity to GB:AAD17960.1; match to protein family HMM PF05494.
  
     0.600
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.547
PFL_1453
Conserved hypothetical protein; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
       0.536
PFL_0316
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
  
 0.513
yaeT
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.512
PFL_1458
Putative lipoprotein.
 
    0.479
PFL_1454
Putative membrane protein; Identified by match to protein family HMM PF01594.
       0.474
PFL_5161
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
 
   
 0.460
PFL_5132
Putative lipoprotein.
  
     0.445
PFL_1792
Conserved hypothetical protein; Identified by match to protein family HMM PF02620.
  
     0.440
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.