Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| PFL_1558 | PFL_1559 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF06445. | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 0.530 |
| PFL_1559 | PFL_1558 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF06445. | 0.530 |
| PFL_1559 | PFL_1560 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Conserved hypothetical protein. | 0.506 |
| PFL_1559 | PFL_2038 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Putative N-hydroxyarylamine O-acetyltransferase; Identified by similarity to SP:Q00267; match to protein family HMM PF00797; Belongs to the arylamine N-acetyltransferase family. | 0.475 |
| PFL_1559 | PFL_2446 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Identified by match to protein family HMM PF01381. | 0.518 |
| PFL_1559 | PFL_3316 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 3-demethylubiquinone-9 3-methyltransferase domain protein; Identified by match to protein family HMM PF06983. | 0.659 |
| PFL_1559 | PFL_4148 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. | 0.456 |
| PFL_1559 | PFL_4562 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF04542; match to protein family HMM PF07719; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.607 |
| PFL_1559 | PFL_4563 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Activator of Hsp90 ATPase 1 family protein; Identified by match to protein family HMM PF08327. | 0.468 |
| PFL_1559 | PFL_4564 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | DGPF domain protein; Identified by match to protein family HMM PF04946. | 0.612 |
| PFL_1559 | PFL_4565 | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02246. | 0.539 |
| PFL_1560 | PFL_1559 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 0.506 |
| PFL_2038 | PFL_1559 | Putative N-hydroxyarylamine O-acetyltransferase; Identified by similarity to SP:Q00267; match to protein family HMM PF00797; Belongs to the arylamine N-acetyltransferase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 0.475 |
| PFL_2446 | PFL_1559 | Identified by match to protein family HMM PF01381. | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 0.518 |
| PFL_2446 | PFL_4564 | Identified by match to protein family HMM PF01381. | DGPF domain protein; Identified by match to protein family HMM PF04946. | 0.408 |
| PFL_2446 | PFL_4565 | Identified by match to protein family HMM PF01381. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02246. | 0.424 |
| PFL_3316 | PFL_1559 | 3-demethylubiquinone-9 3-methyltransferase domain protein; Identified by match to protein family HMM PF06983. | Conserved hypothetical protein; Identified by match to protein family HMM PF05988. | 0.659 |
| PFL_3316 | PFL_4562 | 3-demethylubiquinone-9 3-methyltransferase domain protein; Identified by match to protein family HMM PF06983. | RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF04542; match to protein family HMM PF07719; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.656 |
| PFL_3316 | PFL_4563 | 3-demethylubiquinone-9 3-methyltransferase domain protein; Identified by match to protein family HMM PF06983. | Activator of Hsp90 ATPase 1 family protein; Identified by match to protein family HMM PF08327. | 0.747 |
| PFL_3316 | PFL_4564 | 3-demethylubiquinone-9 3-methyltransferase domain protein; Identified by match to protein family HMM PF06983. | DGPF domain protein; Identified by match to protein family HMM PF04946. | 0.648 |
page 1 of 3