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fliK fliK flgJ flgJ fliH fliH fliO fliO fliJ fliJ flgF flgF fliF fliF fliM fliM fliE fliE flgB flgB fliL fliL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
fliKFlagellar hook-length control protein FliK; Identified by match to protein family HMM PF02120. (467 aa)    
Predicted Functional Partners:
flgJ
Flagellar rod assembly protein/muramidase FlgJ; Identified by match to protein family HMM PF01832; match to protein family HMM TIGR02541.
 
  
 0.994
fliH
Flagellar assembly protein FliH; Identified by match to protein family HMM PF02108.
 
  
 0.974
fliO
Flagellar protein FliO; Identified by similarity to SP:Q51467; match to protein family HMM PF04347; match to protein family HMM TIGR03500.
 
  
 0.969
fliJ
Flagellar export protein FliJ; Identified by match to protein family HMM TIGR02473.
 
  
 0.966
flgF
Flagellar basal-body rod protein FlgF; Identified by match to protein family HMM PF00460; match to protein family HMM TIGR02490; match to protein family HMM TIGR03506; Belongs to the flagella basal body rod proteins family.
 
  
 0.964
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.958
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.958
fliE
Flagellar hook-basal body complex protein FliE; Identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205.
 
  
 0.954
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.951
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.948
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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