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PFL_2173 PFL_2173 PFL_3365 PFL_3365 acoC acoC acoA acoA acoB acoB acoX acoX PFL_2274 PFL_2274 PFL_2174 PFL_2174 fruB fruB bioF bioF rzxA rzxA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_2173(R,R)-butanediol dehydrogenase; Identified by similarity to GB:AAB58982.1; match to protein family HMM PF00107; match to protein family HMM PF08240. (357 aa)    
Predicted Functional Partners:
PFL_3365
Putative (R,R)-butanediol dehydrogenase; Identified by similarity to GB:AAB58982.1; match to protein family HMM PF00107; match to protein family HMM PF08240.
  
  
 
0.909
acoC
Acetoin dehydrogenase E2 component, dihydrolipoamide acetyltransferase; Identified by similarity to SP:Q59695; match to protein family HMM PF00364; match to protein family HMM PF00561; match to protein family HMM PF00975.
 
  
 0.775
acoA
Acetoin dehydrogenase E1 component, alpha subunit; Identified by similarity to SP:P27745; match to protein family HMM PF00676.
 
  
 0.750
acoB
Acetoin dehydrogenase E1 component, beta subunit; Identified by similarity to SP:O34591; match to protein family HMM PF02779; match to protein family HMM PF02780.
 
  
 0.738
acoX
Acetoin catabolism protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
  
 0.667
PFL_2274
Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
 
   
 0.541
PFL_2174
Conserved hypothetical protein.
       0.528
fruB
Putative multiphosphoryl transfer protein FruB; Identified by similarity to SP:P45597; match to protein family HMM PF00359; match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; Belongs to the PEP-utilizing enzyme family.
     
 0.517
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.478
rzxA
Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.
 
  
 0.436
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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