STRINGSTRING
PFL_2401 PFL_2401 PFL_2397 PFL_2397 PFL_2399 PFL_2399 PFL_2400 PFL_2400 PFL_0106 PFL_0106 PFL_2398 PFL_2398
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_2401Conserved hypothetical protein; Identified by match to protein family HMM PF09351. (176 aa)    
Predicted Functional Partners:
PFL_2397
S-(hydroxymethyl)glutathione synthase; Identified by match to protein family HMM PF04828.
 
     0.570
PFL_2399
Putative membrane protein; Identified by match to protein family HMM PF04140.
       0.532
PFL_2400
Conserved hypothetical protein.
       0.532
PFL_0106
Conserved hypothetical protein; Identified by similarity to PIR:H82962; match to protein family HMM PF04828.
  
     0.458
PFL_2398
Conserved hypothetical protein.
       0.452
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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