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PFL_2466 PFL_2466 pncB_1 pncB_1 pncB_2 pncB_2 rihA rihA cobB-3 cobB-3 nadE_1 nadE_1 PFL_2465 PFL_2465 nadE_2 nadE_2 PFL_2464 PFL_2464 PFL_2463 PFL_2463 pchB pchB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_2466Identified by match to protein family HMM PF00857. (215 aa)    
Predicted Functional Partners:
pncB_1
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
 
 
 0.994
pncB_2
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
 
 
 0.975
rihA
Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by similarity to SP:P41409; match to protein family HMM PF01156; Belongs to the IUNH family.
  
  
 0.917
cobB-3
NAD-dependent deacetylase; Identified by similarity to SP:Q9I4L0; match to protein family HMM PF02146; Belongs to the sirtuin family. Class III subfamily.
  
 0.913
nadE_1
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
  
 0.893
PFL_2465
Cytidyltransferase domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125.
     
 0.650
nadE_2
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
  
 0.571
PFL_2464
Conserved hypothetical protein.
     
 0.571
PFL_2463
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
  
    0.530
pchB
Isochorismate pyruvate-lyase PchB; Previously identified and characterized. See Youard et al 2007 (PMID: 17938167) for more information; identified by similarity to GB:ABW70805.1; match to protein family HMM PF01817; match to protein family HMM TIGR01803.
      
 0.530
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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