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PFL_3158 PFL_3158 pvdF pvdF PFL_0879 PFL_0879 PFL_3683 PFL_3683 PFL_1272 PFL_1272 PFL_1696 PFL_1696 ygfO ygfO phaG phaG fliK fliK PFL_4577 PFL_4577 PFL_3719 PFL_3719
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_3158Putative lipoprotein; Identified by similarity to GB:AAS20057.1. (153 aa)    
Predicted Functional Partners:
pvdF
N(5)-hydroxyornithine transformylase PvdF; See PMID: 11390682; identified by similarity to GB:AAG05784.1.
  
     0.662
PFL_0879
Outer membrane porin, OprD family; Identified by similarity to SP:P32722; match to protein family HMM PF03573.
  
     0.561
PFL_3683
Outer membrane porin, OprD family; Identified by similarity to SP:P32722; match to protein family HMM PF03573.
  
     0.548
PFL_1272
Conserved hypothetical protein.
  
     0.481
PFL_1696
Putative urea transporter; Identified by match to protein family HMM PF03253.
  
     0.480
ygfO
High-affinity xanthine transporter, NCS2 family, YgfO; Identified by similarity to SP:P67444; match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173.
       0.472
phaG
(R)-3-hydroxydecanoyl-ACP:CoA transacylase; Identified by similarity to SP:O85207; match to protein family HMM PF00561.
  
     0.460
fliK
Flagellar hook-length control protein FliK; Identified by match to protein family HMM PF02120.
  
     0.453
PFL_4577
Translocator protein, LysE family; Identified by match to protein family HMM PF01810.
  
     0.422
PFL_3719
Putative membrane protein.
  
     0.413
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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