STRINGSTRING
hpaC hpaC hpaB hpaB hpaD hpaD bluB bluB msuE msuE ribF ribF ssuE ssuE ribE-2 ribE-2 PFL_6016 PFL_6016 PFL_0320 PFL_0320 PFL_0997 PFL_0997
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaC4-hydroxyphenylacetate 3-monooxygenase, reductase component; Identified by similarity to SP:Q57501; match to protein family HMM PF01613; match to protein family HMM TIGR02296. (170 aa)    
Predicted Functional Partners:
hpaB
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Identified by similarity to SP:Q57160; match to protein family HMM PF03241; match to protein family HMM TIGR02310.
 
 
 0.985
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Identified by similarity to SP:Q05353; match to protein family HMM PF02900; match to protein family HMM TIGR02298.
 
 
 0.927
bluB
cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476.
  
 
 0.915
msuE
NADH-dependent FMN reductase; Identified by similarity to SP:O31038; match to protein family HMM PF03358; match to protein family HMM TIGR03566.
    
 0.903
ribF
Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.
    
  0.903
ssuE
NADH-dependent FMN reductase; Identified by similarity to SP:O85762; match to protein family HMM PF02525; match to protein family HMM PF03358; match to protein family HMM TIGR03567.
    
 0.903
ribE-2
Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
    
  0.902
PFL_6016
HAD-superfamily hydrolase, subfamily IA, variant 1 and 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
     
 0.901
PFL_0320
Putative acid phosphatase; Identified by similarity to GB:BAA84942.1; match to protein family HMM PF01569.
     
 0.900
PFL_0997
Putative acid phosphatase; Identified by similarity to SP:P28581; match to protein family HMM PF01569.
     
 0.900
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.