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PFL_3361 PFL_3361 PFL_3360 PFL_3360 PFL_3359 PFL_3359 htpG htpG PFL_1033 PFL_1033 PFL_3358 PFL_3358 PFL_3336 PFL_3336 PFL_1384 PFL_1384 PFL_5670 PFL_5670 gap_2 gap_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_3361Identified by match to protein family HMM PF00850. (377 aa)    
Predicted Functional Partners:
PFL_3360
Transporter, major facilitator family; Identified by match to protein family HMM PF07690.
 
     0.696
PFL_3359
Conserved hypothetical protein.
 
     0.592
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.552
PFL_1033
Identified by match to protein family HMM PF00400.
  
 
 0.533
PFL_3358
Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281.
 
     0.527
PFL_3336
Putative lipoprotein; Identified by similarity to PIR:AG0086.
  
 
 0.506
PFL_1384
Monoamine oxidase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR01409.
   
 0.441
PFL_5670
Monoamine oxidase; Identified by similarity to SP:P06617; match to protein family HMM PF01593.
   
 0.441
gap_2
Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
   
 0.433
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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