Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PFL_0521 | PFL_0884 | PFL_0521 | PFL_0884 | Identified by match to protein family HMM PF02585. | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.512 |
| PFL_0521 | PFL_1163 | PFL_0521 | PFL_1163 | Identified by match to protein family HMM PF02585. | Conserved hypothetical protein. | 0.698 |
| PFL_0521 | PFL_1185 | PFL_0521 | PFL_1185 | Identified by match to protein family HMM PF02585. | Outer membrane protein, Skp family; Identified by similarity to SP:P31519; match to protein family HMM PF03938. | 0.725 |
| PFL_0521 | PFL_1578 | PFL_0521 | PFL_1578 | Identified by match to protein family HMM PF02585. | Identified by match to protein family HMM TIGR02292; Belongs to the UPF0149 family. | 0.613 |
| PFL_0521 | PFL_4782 | PFL_0521 | PFL_4782 | Identified by match to protein family HMM PF02585. | Conserved hypothetical protein. | 0.653 |
| PFL_0521 | mucA | PFL_0521 | PFL_1449 | Identified by match to protein family HMM PF02585. | Sigma factor AlgU negative regulatory protein MucA; Identified by similarity to GB:AAK94007.1; match to protein family HMM PF03872; match to protein family HMM PF03873. | 0.710 |
| PFL_0521 | mvaV | PFL_0521 | PFL_3391 | Identified by match to protein family HMM PF02585. | Transcriptional regulator MvaV; Identified by similarity to GB:AAX18931.1. | 0.580 |
| PFL_0681 | PFL_4782 | PFL_0681 | PFL_4782 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.644 |
| PFL_0681 | PFL_5774 | PFL_0681 | PFL_5774 | Conserved hypothetical protein. | Integral membrane protein, YccS/YhfK family; Identified by match to protein family HMM PF05976; match to protein family HMM TIGR01666; match to protein family HMM TIGR01667. | 0.624 |
| PFL_0681 | PFL_6127 | PFL_0681 | PFL_6127 | Conserved hypothetical protein. | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.466 |
| PFL_0681 | mucA | PFL_0681 | PFL_1449 | Conserved hypothetical protein. | Sigma factor AlgU negative regulatory protein MucA; Identified by similarity to GB:AAK94007.1; match to protein family HMM PF03872; match to protein family HMM PF03873. | 0.416 |
| PFL_0681 | mvaV | PFL_0681 | PFL_3391 | Conserved hypothetical protein. | Transcriptional regulator MvaV; Identified by similarity to GB:AAX18931.1. | 0.726 |
| PFL_0884 | PFL_0521 | PFL_0884 | PFL_0521 | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | Identified by match to protein family HMM PF02585. | 0.512 |
| PFL_0884 | PFL_1163 | PFL_0884 | PFL_1163 | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | Conserved hypothetical protein. | 0.467 |
| PFL_0884 | PFL_1185 | PFL_0884 | PFL_1185 | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | Outer membrane protein, Skp family; Identified by similarity to SP:P31519; match to protein family HMM PF03938. | 0.561 |
| PFL_0884 | mucA | PFL_0884 | PFL_1449 | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | Sigma factor AlgU negative regulatory protein MucA; Identified by similarity to GB:AAK94007.1; match to protein family HMM PF03872; match to protein family HMM PF03873. | 0.551 |
| PFL_0884 | mvaV | PFL_0884 | PFL_3391 | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | Transcriptional regulator MvaV; Identified by similarity to GB:AAX18931.1. | 0.614 |
| PFL_1163 | PFL_0521 | PFL_1163 | PFL_0521 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02585. | 0.698 |
| PFL_1163 | PFL_0884 | PFL_1163 | PFL_0884 | Conserved hypothetical protein. | Sensor histidine kinase; Identified by similarity to GB:BAA31475.1; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.467 |
| PFL_1163 | PFL_1185 | PFL_1163 | PFL_1185 | Conserved hypothetical protein. | Outer membrane protein, Skp family; Identified by similarity to SP:P31519; match to protein family HMM PF03938. | 0.747 |
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