lys1_2 protein (Pseudomonas protegens) - STRING interaction network

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Score

lys1_2

Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435. (414 aa)

Predicted Functional Partners:

nspC

0.949

rzxA

0.522

PFL_4656

0.454

PFL_3537

0.451

PFL_3540

0.443

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_3537	PFL_4656	PFL_3537	PFL_4656	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	0.422
PFL_3537	lys1_2	PFL_3537	PFL_3539	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	0.451
PFL_3537	nspC	PFL_3537	PFL_3538	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	0.502
PFL_3537	rzxA	PFL_3537	PFL_2997	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	0.857
PFL_3540	lys1_2	PFL_3540	PFL_3539	Putative dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887.	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	0.443
PFL_3540	nspC	PFL_3540	PFL_3538	Putative dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887.	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	0.434
PFL_4656	PFL_3537	PFL_4656	PFL_3537	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.422
PFL_4656	lys1_2	PFL_4656	PFL_3539	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	0.454
PFL_4656	rzxA	PFL_4656	PFL_2997	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	0.999
lys1_2	PFL_3537	PFL_3539	PFL_3537	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.451
lys1_2	PFL_3540	PFL_3539	PFL_3540	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	Putative dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887.	0.443
lys1_2	PFL_4656	PFL_3539	PFL_4656	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	0.454
lys1_2	nspC	PFL_3539	PFL_3538	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	0.949
lys1_2	rzxA	PFL_3539	PFL_2997	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	0.522
nspC	PFL_3537	PFL_3538	PFL_3537	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.502
nspC	PFL_3540	PFL_3538	PFL_3540	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	Putative dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887.	0.434
nspC	lys1_2	PFL_3538	PFL_3539	Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	0.949
rzxA	PFL_3537	PFL_2997	PFL_3537	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.857
rzxA	PFL_4656	PFL_2997	PFL_4656	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.	0.999
rzxA	lys1_2	PFL_2997	PFL_3539	Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA; Previously identified and characterized. See Loper et al 2008 (PMID: 18344330) and Brendel et al 2007 (PMID: 17609750) for more information; identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM PF08415.	Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.	0.522

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