Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PFL_0702 | PFL_3694 | Putative lipoprotein. | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | 0.473 |
PFL_0702 | PFL_3695 | Putative lipoprotein. | Putative lipoprotein. | 0.631 |
PFL_0702 | PFL_3696 | Putative lipoprotein. | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | 0.471 |
PFL_0702 | PFL_5749 | Putative lipoprotein. | Identified by match to protein family HMM PF01381. | 0.497 |
PFL_3693 | PFL_3694 | Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | 0.423 |
PFL_3693 | PFL_3695 | Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | Putative lipoprotein. | 0.423 |
PFL_3694 | PFL_0702 | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | Putative lipoprotein. | 0.473 |
PFL_3694 | PFL_3693 | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | 0.423 |
PFL_3694 | PFL_3695 | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | Putative lipoprotein. | 0.984 |
PFL_3694 | PFL_3696 | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | 0.963 |
PFL_3694 | PFL_5749 | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | Identified by match to protein family HMM PF01381. | 0.583 |
PFL_3695 | PFL_0702 | Putative lipoprotein. | Putative lipoprotein. | 0.631 |
PFL_3695 | PFL_3693 | Putative lipoprotein. | Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | 0.423 |
PFL_3695 | PFL_3694 | Putative lipoprotein. | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | 0.984 |
PFL_3695 | PFL_3696 | Putative lipoprotein. | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | 0.975 |
PFL_3695 | PFL_5749 | Putative lipoprotein. | Identified by match to protein family HMM PF01381. | 0.634 |
PFL_3696 | PFL_0702 | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | Putative lipoprotein. | 0.471 |
PFL_3696 | PFL_3694 | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | Putative lipoprotein, DUF799 family; Identified by match to protein family HMM PF05643. | 0.963 |
PFL_3696 | PFL_3695 | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | Putative lipoprotein. | 0.975 |
PFL_3696 | PFL_5749 | Curli production assembly/transport component CsgG; Identified by match to protein family HMM PF03783. | Identified by match to protein family HMM PF01381. | 0.601 |
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