node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
clpA | clpS | PFL_3885 | PFL_3886 | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by similarity to SP:P0ABH9; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.974 |
clpA | cspD | PFL_3885 | PFL_3887 | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by similarity to SP:P0ABH9; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | 0.679 |
clpS | clpA | PFL_3886 | PFL_3885 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by similarity to SP:P0ABH9; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | 0.974 |
clpS | cspD | PFL_3886 | PFL_3887 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | 0.794 |
cspD | clpA | PFL_3887 | PFL_3885 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by similarity to SP:P0ABH9; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | 0.679 |
cspD | clpS | PFL_3887 | PFL_3886 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.794 |
cspD | pnp | PFL_3887 | PFL_0848 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.435 |
cspD | rplP | PFL_3887 | PFL_5575 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.550 |
cspD | rplT | PFL_3887 | PFL_2114 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.534 |
cspD | rpmJ | PFL_3887 | PFL_3806 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.448 |
cspD | rpsE | PFL_3887 | PFL_5565 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.581 |
cspD | rpsL | PFL_3887 | PFL_5587 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.540 |
cspD | rpsS | PFL_3887 | PFL_5578 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.544 |
cspD | yhbH | PFL_3887 | PFL_0914 | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | Putative sigma(54) modulation protein; Identified by similarity to SP:P0AFX0; match to protein family HMM PF02482; match to protein family HMM TIGR00741. | 0.508 |
pnp | cspD | PFL_0848 | PFL_3887 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Cold shock domain protein CspD; Identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381. | 0.435 |
pnp | rplP | PFL_0848 | PFL_5575 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.775 |
pnp | rplT | PFL_0848 | PFL_2114 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.832 |
pnp | rpsE | PFL_0848 | PFL_5565 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.681 |
pnp | rpsL | PFL_0848 | PFL_5587 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.645 |
pnp | rpsS | PFL_0848 | PFL_5578 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.688 |