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PFL_4083 PFL_4083 macB2 macB2 PFL_4081 PFL_4081 acrA acrA emhA emhA mexE mexE mexF mexF acrB acrB emhB emhB PFL_5048 PFL_5048 PFL_2148 PFL_2148
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_4083Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845. (463 aa)    
Predicted Functional Partners:
macB2
Efflux ABC transporter, ATP-binding/permease protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.978
PFL_4081
Efflux transporter, RND family, MFP subunit; Identified by similarity to GB:AAX16332.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.941
acrA
Identified by similarity to SP:P0AE06; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.784
emhA
Efflux transporter, membrane fusion protein subunit EmhA; Identified by similarity to GB:AAQ92180.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.776
mexE
Multidrug efflux RND transporter, membrane fusion protein MexE; Identified by similarity to GB:CAA67866.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.773
mexF
Multidrug efflux RND transporter, permease protein MexF; Identified by similarity to GB:CAA67864.1; match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 
 0.759
acrB
Identified by similarity to SP:P31224; match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 
 0.759
emhB
Efflux transporter, permease protein EmhB; Identified by similarity to GB:AAQ92181.1; match to protein family HMM PF00873; match to protein family HMM TIGR00915.
 
 0.756
PFL_5048
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P76397; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.713
PFL_2148
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P75830; match to protein family HMM PF00364; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.700
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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