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PFL_4125 PFL_4125 PFL_4126 PFL_4126 PFL_2048 PFL_2048 PFL_0258 PFL_0258 emrA emrA PFL_0143 PFL_0143 PFL_4127 PFL_4127 PFL_2541 PFL_2541 PFL_4128 PFL_4128 PFL_4602 PFL_4602 PFL_4129 PFL_4129
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
PFL_4125Drug resistance transporter, EmrB/QacA family; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. (529 aa)    
Predicted Functional Partners:
PFL_4126
Auxiliary transport protein, membrane fusion protein family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01409.
 
 
 0.963
PFL_2048
Auxiliary transport protein, membrane fusion protein family; Identified by match to protein family HMM PF00529.
 
 
 0.846
PFL_0258
Auxiliary transport protein, MFP family; Identified by match to protein family HMM PF00529.
 
 
 0.845
emrA
Identified by similarity to SP:P27303; match to protein family HMM PF00529.
 
 
 0.841
PFL_0143
Auxiliary transport protein, membrane fusion protein family; Identified by match to protein family HMM PF00529.
 
 
 0.840
PFL_4127
Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
  
  
 0.793
PFL_2541
Auxiliary transport protein, membrane fusion protein family; Identified by match to protein family HMM PF00529.
 
     0.730
PFL_4128
Conserved hypothetical protein.
       0.693
PFL_4602
Auxiliary transport protein, membrane fusion protein family; Identified by match to protein family HMM PF00529; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.569
PFL_4129
Conserved hypothetical protein; Identified by similarity to GB:CAD14235.1.
       0.517
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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