Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| PFL_0554 | PFL_4170 | HDOD domain protein; Identified by match to protein family HMM PF08668. | Conserved hypothetical protein. | 0.606 |
| PFL_0554 | PFL_4171 | HDOD domain protein; Identified by match to protein family HMM PF08668. | Conserved hypothetical protein. | 0.417 |
| PFL_0554 | PFL_4176 | HDOD domain protein; Identified by match to protein family HMM PF08668. | Conserved hypothetical protein. | 0.558 |
| PFL_0554 | PFL_5239 | HDOD domain protein; Identified by match to protein family HMM PF08668. | Conserved hypothetical protein. | 0.773 |
| PFL_4098 | PFL_4170 | Transporter, major facilitator family; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.655 |
| PFL_4098 | PFL_4176 | Transporter, major facilitator family; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.614 |
| PFL_4169 | PFL_4170 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Conserved hypothetical protein. | 0.980 |
| PFL_4169 | PFL_4171 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Conserved hypothetical protein. | 0.947 |
| PFL_4169 | PFL_4172 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Conserved hypothetical protein. | 0.916 |
| PFL_4169 | PFL_4173 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Cation ABC transporter, MZT family, periplasmic cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.884 |
| PFL_4169 | PFL_4174 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Cation ABC transporter, MZT family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.837 |
| PFL_4169 | PFL_4175 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Cation ABC transporter, MZT family, permease protein; Identified by match to protein family HMM PF00950. | 0.840 |
| PFL_4169 | PFL_4176 | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | Conserved hypothetical protein. | 0.924 |
| PFL_4170 | PFL_0554 | Conserved hypothetical protein. | HDOD domain protein; Identified by match to protein family HMM PF08668. | 0.606 |
| PFL_4170 | PFL_4098 | Conserved hypothetical protein. | Transporter, major facilitator family; Identified by match to protein family HMM PF07690. | 0.655 |
| PFL_4170 | PFL_4169 | Conserved hypothetical protein. | PepSY-associated TM helix domain protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | 0.980 |
| PFL_4170 | PFL_4171 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.985 |
| PFL_4170 | PFL_4172 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.927 |
| PFL_4170 | PFL_4173 | Conserved hypothetical protein. | Cation ABC transporter, MZT family, periplasmic cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.955 |
| PFL_4170 | PFL_4174 | Conserved hypothetical protein. | Cation ABC transporter, MZT family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.966 |
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