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allA allA alc alc PFL_3803 PFL_3803 PFL_4370 PFL_4370 ureB ureB ureC ureC ureA ureA gcl gcl glcB glcB uraD uraD aceA aceA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
allAUreidoglycolate lyase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. (167 aa)    
Predicted Functional Partners:
alc
Allantoicase; Identified by similarity to SP:Q9W6S5; match to protein family HMM PF03561; match to protein family HMM TIGR02961; match to protein family HMM TIGR03163; Belongs to the allantoicase family.
 
  0.988
PFL_3803
Conserved hypothetical protein; Identified by match to protein family HMM PF05899; match to protein family HMM PF07883; match to protein family HMM TIGR03214.
 
  
  0.960
PFL_4370
Membrane protein, DUF989 family; Identified by match to protein family HMM PF06181.
 
    0.929
ureB
Urease, beta subunit; Identified by similarity to SP:P18315; match to protein family HMM PF00699; match to protein family HMM TIGR00192; Belongs to the urease beta subunit family.
    
 0.905
ureC
Urease, alpha subunit; Identified by similarity to SP:P18314; match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01792; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
  0.902
ureA
Urease, gamma subunit; Identified by similarity to SP:P73796; match to protein family HMM PF00547; match to protein family HMM TIGR00193; Belongs to the urease gamma subunit family.
    
  0.902
gcl
Glyoxylate carboligase; Identified by similarity to SP:P30146; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR01504; Belongs to the TPP enzyme family.
 
  
 0.864
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
  
 0.855
uraD
OHCU decarboxylase; Identified by similarity to SP:Q45697; match to protein family HMM PF09349; match to protein family HMM TIGR03164.
 
    0.846
aceA
Isocitrate lyase; Identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346.
     
 0.810
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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