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tag_1 tag_1 polA polA arsC_1 arsC_1 wrbA wrbA PFL_4458 PFL_4458 PFL_3927 PFL_3927 alkA alkA PFL_4455 PFL_4455 PFL_0379 PFL_0379 PFL_5256 PFL_5256
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
tag_1DNA-3-methyladenine glycosylase 1; Identified by similarity to SP:P05100. (223 aa)    
Predicted Functional Partners:
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.646
arsC_1
Arsenate reductase; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014.
       0.575
wrbA
NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM TIGR01755; Belongs to the WrbA family.
       0.571
PFL_4458
Conserved hypothetical protein.
       0.548
PFL_3927
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
 
     0.493
alkA
DNA-3-methyladenine glycosylase II; Identified by similarity to SP:P04395; match to protein family HMM PF00730; match to protein family HMM PF06029.
     
 0.473
PFL_4455
Antioxidant, AhpC/TSA family; Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.
       0.442
PFL_0379
methylated-DNA-[protein]-cysteine S-methyltransferase, ADA family; Identified by similarity to SP:P06134; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589.
 
   
 0.437
PFL_5256
Conserved hypothetical protein; Identified by match to protein family HMM PF04287.
  
     0.405
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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