Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PFL_4472 | PFL_5259 | PFL_4472 | PFL_5259 | Identified by match to protein family HMM PF01738. | Conserved hypothetical protein. | 0.547 |
| PFL_4472 | PFL_6046 | PFL_4472 | PFL_6046 | Identified by match to protein family HMM PF01738. | Identified by similarity to SP:P23883; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.512 |
| PFL_4472 | gcvP_1 | PFL_4472 | PFL_4641 | Identified by match to protein family HMM PF01738. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.420 |
| PFL_4472 | gcvP_2 | PFL_4472 | PFL_5959 | Identified by match to protein family HMM PF01738. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.420 |
| PFL_4472 | oprH | PFL_4472 | PFL_4471 | Identified by match to protein family HMM PF01738. | Outer membrane protein H1; Identified by similarity to GB:ACB54964.1. | 0.555 |
| PFL_4472 | pcpS | PFL_4472 | PFL_4473 | Identified by match to protein family HMM PF01738. | Multifunctional 4'-phosphopantetheinyl transferase PcpS; See PMID: 12381736 and PMID: 15073290 for more information; identified by similarity to GB:AAG04554.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily. | 0.542 |
| PFL_5259 | PFL_4472 | PFL_5259 | PFL_4472 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01738. | 0.547 |
| PFL_6046 | PFL_4472 | PFL_6046 | PFL_4472 | Identified by similarity to SP:P23883; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Identified by match to protein family HMM PF01738. | 0.512 |
| gcvP_1 | PFL_4472 | PFL_4641 | PFL_4472 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Identified by match to protein family HMM PF01738. | 0.420 |
| gcvP_1 | gcvP_2 | PFL_4641 | PFL_5959 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvP_2 | PFL_4472 | PFL_5959 | PFL_4472 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Identified by match to protein family HMM PF01738. | 0.420 |
| gcvP_2 | gcvP_1 | PFL_5959 | PFL_4641 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| oprH | PFL_4472 | PFL_4471 | PFL_4472 | Outer membrane protein H1; Identified by similarity to GB:ACB54964.1. | Identified by match to protein family HMM PF01738. | 0.555 |
| oprH | pcpS | PFL_4471 | PFL_4473 | Outer membrane protein H1; Identified by similarity to GB:ACB54964.1. | Multifunctional 4'-phosphopantetheinyl transferase PcpS; See PMID: 12381736 and PMID: 15073290 for more information; identified by similarity to GB:AAG04554.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily. | 0.457 |
| pcpS | PFL_4472 | PFL_4473 | PFL_4472 | Multifunctional 4'-phosphopantetheinyl transferase PcpS; See PMID: 12381736 and PMID: 15073290 for more information; identified by similarity to GB:AAG04554.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily. | Identified by match to protein family HMM PF01738. | 0.542 |
| pcpS | oprH | PFL_4473 | PFL_4471 | Multifunctional 4'-phosphopantetheinyl transferase PcpS; See PMID: 12381736 and PMID: 15073290 for more information; identified by similarity to GB:AAG04554.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily. | Outer membrane protein H1; Identified by similarity to GB:ACB54964.1. | 0.457 |