STRINGSTRING
pcpS pcpS pchE pchE pchF pchF pvdJ pvdJ ofaB ofaB ofaC ofaC PFL_4656 PFL_4656 ofaA ofaA pvdD pvdD pchD pchD pvdI pvdI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpSMultifunctional 4'-phosphopantetheinyl transferase PcpS; See PMID: 12381736 and PMID: 15073290 for more information; identified by similarity to GB:AAG04554.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily. (241 aa)    
Predicted Functional Partners:
pchE
Enantio-pyochelin synthetase E; Previously identified and characterized. See Youard et al 2007 (PMID: 17938167) for more information; identified by similarity to GB:ABW70809.1; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08415; match to protein family HMM TIGR01733.
 
  
 0.968
pchF
Enantio-pyochelin synthetase F; Previously identified and characterized. See Youard et al 2007 (PMID: 17938167) for more information; identified by similarity to GB:ABW70808.1; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM PF08415; match to protein family HMM TIGR01733.
 
  
 0.946
pvdJ
Non-ribosomal peptide synthetase PvdJ; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
 
  
 0.939
ofaB
Non-ribosomal peptide synthetase OfaB; Previously identified and characterized. See Gross et al 2007 (PMID: 17254952) for more information; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
 
  
 0.902
ofaC
Non-ribosomal peptide synthetase OfaC; Previously identified and characterized. See Gross et al 2007 (PMID: 17254952) for more information; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.
 
  
 0.902
PFL_4656
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00668.
 
  
 0.896
ofaA
Non-ribosomal peptide synthetase OfaA; Previously identified and characterized. See Gross et al 2007 (PMID: 17254952) for more information; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
 
  
 0.895
pvdD
Non-ribosomal peptide synthetase PvdD; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
 
  
 0.893
pchD
salicyl-AMP ligase; Previously identified and characterized. See Youard et al 2007 (PMID: 17938167) for more information; identified by similarity to GB:AAD55799.1; similarity to GB:ABW70812.1; match to protein family HMM PF00501.
 
  
 0.883
pvdI
Non-ribosomal peptide synthetase PvdI; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
 
  
 0.827
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.